Author

Xiang Li

Pennsylvania State UniversityORCID 0000-0001-8499-4740Unclaimed ORCID profile · follow to get notified of new preprints

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Xiang Li19 papers · La Jolla Institute for Immunology

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:long-read sequencing· 1 Research Focus:sequence-to-function modeling· 1 Research Focus:software / tool· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Mingfu ShaoiD· 2 shared Ke CheniD· 1 shared Tasfia ZahiniD· 1 shared Zhezheng SongiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersBioinformatics

Mingfu ShaoORCID

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2 papers

Recent·Most cited

BioinformaticsGenome ResearchPeer-reviewedDec 1, 2025

Accurate Detection of Tandem Repeats from Error-Prone Sequences with EquiRep

Zhezheng Song, Tasfia Zahin, Xiang Li, Mingfu Shao

EquiRep accurately detects tandem repeats from error-prone sequences by refining unit estimation and reconstructing repeat units through a weighted graph approach.

2 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedJul 23, 2025

Efficient Seeding for Error-Prone Sequences with SubseqHash2

Xiang Li, Ke Chen, Mingfu Shao

This paper introduces SubseqHash2, an improved subsequence-based seeding method that achieves faster computation while maintaining high accuracy for error-prone long reads.

4 citations

long-read sequencingstatistical model

𝕏 PostBluesky