Author

Nastassia Patin

National Oceanic and Atmospheric AdministrationORCID 0000-0001-8522-7682Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:ecology & biodiversity· 1 Organism:multiple species· 1

Frequent Co-Authors

Andrew Ellis AlleniD· 1 shared Brice Xavier SemmensiD· 1 shared Erin V. SatterthwaiteiD· 1 shared Grant SandersoniD· 1 shared Julie DinasquetiD· 1 shared Katherine G. Chan· 1 shared Kelly D. GoodwiniD· 1 shared Len ThomasiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperEcology

Andrew Ellis AllenORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Microbial and small zooplankton communities predict density of baleen whales in the southern California Current Ecosystem

Erin V. Satterthwaite, Trevor Ruiz, Nastassia Patin, Michaela N. Alksne, Len Thomas, Julie Dinasquet, Robert H. Lampe, Katherine G. Chan, Nicholas A Patrick, Andrew Ellis Allen, Simone Baumann‐Pickering, Brice Xavier Semmens

The paper uses microbial and small plankton communities to predict baleen whale densities in the Southern California Current Ecosystem, finding strong predictive relationships with up to 99% variability explained.

PLoS ONE · May 6, 2026Peer-reviewedEcology

Tourmaline: a containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake

Luke Thompson, Sean R. Anderson, Paul A. Den Uyl, Nastassia Patin, Shen Jean Lim, Grant Sanderson, Kelly D. Goodwin

Tourmaline automates amplicon sequence analysis using QIIME 2 and Snakemake, enabling rapid and reproducible processing of environmental and biomedical data.

GigaScience · Jan 1, 2022Peer-reviewedBioinformatics