Author

J. Alvarez

ORCID 0000-0001-9009-823XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

J. Alvarez2 papers

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Jayson GutiérreziD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintApr 29, 2026

Whole-Proteome ESM-2 Embeddings Recover Taxonomy and Enable Geometry-Aware Triage of Foodborne Bacterial Genomes

Jayson Gutiérrez, J. Alvarez

The paper uses ESM-2 embeddings to represent bacterial genomes, recovering taxonomy and enabling geometry-aware triage in foodborne pathogen surveillance.

1 citation

bacteria (other)whole-genome sequencing

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