Author

Xu Yang

Guizhou UniversityORCID 0000-0001-9212-9781Unclaimed ORCID profile · follow to get notified of new preprints

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Xu yang1 paper · Guizhou University

Biology Disciplines

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Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Organism:plant (other)· 1 Approach:transformer / foundation model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Entang TianiD· 1 shared Hairun Jin· 1 shared Jinze Zhang· 1 shared Kunjiang YuiD· 1 shared Lijing Xiao· 1 shared Qingjing Ouyang· 1 shared Weicai LongiD· 1 shared Yanlin ZhangiD· 1 shared

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2024-2025 · peak 1/yr

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10 top collaborators · 24 mutual co-author links

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1 shared paperPlant Biology

Entang TianORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintDec 1, 2025

Mut-BPE: A Modified BPE Strategy Improves Variant Effect Prediction

Yucheng Xu, Weicai Long, Yawen Lu…·Yanlin Zhang

Mut-BPE improves variant effect prediction by enhancing BPE tokenization with single-nucleotide resolution, showing better performance in AUROC and AUPRC across multiple datasets.

1 citation

whole-genome sequencingstatistical model

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Plant BiologyPhysiological and Molecular Plant PathologyPeer-reviewedJun 11, 2024

Disease resistance of Brassica juncea to Sclerotinia sclerotiorum is established through the induction of indole glucosinolate biosynthesis

Jinze Zhang, Xu Yang, Yingfen Jiang…·Entang Tian

The paper identifies a resistant Brassica juncea line H83 and reveals a novel regulatory network involving indole glucosinolate biosynthesis in response to Sclerotinia sclerotiorum infection.

4 citations

plant (other)bulk RNA-seq

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