Author

Karl Cottenie

University of GuelphORCID 0000-0001-9498-8483Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Brent SayloriD· 1 shared Maegwin BonariD· 1 shared Mirza A M AhmadiiD· 1 shared Samantha E. MajorosiD· 1 shared Sarah J. AdamowicziD· 1 shared Stefan C. KremeriD· 1 shared Stefan LinquistiD· 1 shared T. Ryan GregoryiD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 10 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Brent SaylorORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GenomicsGenome Biology and EvolutionPeer-reviewedJun 1, 2026

Biological implications of a detailed repeat annotation in Octopus vulgaris

Maegwin Bonar, Tyler A. Elliott, Mirza A M Ahmadi…·Stefan Linquist

The paper provides a refined repeat annotation of Octopus vulgaris genome, revealing higher repeat content and multiple TE expansion events compared to previous studies.

DOI 10.1093/gbe/evag137

non-human primatewhole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 23, 2023

Novel Pipeline for Large-Scale Comparative Population Genetics

Samantha E. Majoros, Karl Cottenie, Sarah J. Adamowicz

This study develops a reusable bioinformatics pipeline for population genetics analysis, showing habitat and larval diet influence population genetic structure in Diptera species.

1 citation

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintJun 11, 2019

Genomic Environments and Their Influence on Transposable Element Communities

Brent Saylor, Stefan C. Kremer, T. Ryan Gregory, Karl Cottenie

The paper uses community ecology methods to analyze transposable element distribution across genomes, finding that TE patterns are influenced by genomic location and 3D structure.

2 citations

humanmultiple species

𝕏 PostBluesky