Author

Sabine S. Tötemeyer

University of NottinghamORCID 0000-0001-9781-2475Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Organism:plant (other)· 1

Frequent Co-Authors

Adam Mark BlanchardiD· 2 shared Laurence ShawiD· 2 shared Catrin Sian RutlandiD· 1 shared Ceri E. StaleyiD· 1 shared Charlotte Back· 1 shared Christina‐Marie BaumbachiD· 1 shared Dov Joseph StekeliD· 1 shared Gary EntricaniD· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Adam Mark BlanchardORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GenomicsFrontiers in GeneticsPeer-reviewedOct 24, 2022

Gut transcriptome reveals differential gene expression and enriched pathways linked to immune activation in response to weaning in pigs.

Melanie Le Bon, Sabine S. Tötemeyer, Richard David Emes, Kenneth H. Mellits

This study identifies transcriptomic changes in pig colons post-weaning, revealing immune activation and amino acid metabolism pathways linked to gut inflammation and barrier dysfunction.

7 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky

GenomicsInfection and ImmunityPeer-reviewedJul 6, 2021

A Trifector of New Insights into Ovine Footrot for Infection Drivers, Immune Response and Host Pathogen Interactions

Adam Mark Blanchard, Ceri E. Staley, Laurence Shaw…·Sabine S. Tötemeyer

This paper analyzes the bacterial and host transcriptomes in ovine footrot to identify infection drivers, immune responses, and host-pathogen interactions in a natural polymicrobial infection.

8 citations

metagenomicsbulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 16, 2017

DirtyGenes: significance testing for gene or bacterial population composition changes using the Dirichlet distribution

Laurence Shaw, Adam Mark Blanchard, Qing‐Lin Chen…·Dov Joseph Stekel

DirtyGenes tests the significance of changes in bacterial populations or gene composition using the Dirichlet distribution, applied to microbiome data from environmental and animal samples.

DOI 10.1101/204321

metagenomicsstatistical model

𝕏 PostBluesky