Author

Naoko Ishikawa

Tohoku UniversityORCID 0000-0001-9787-5003Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 1 Genetics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Assay:metagenomics· 1

Frequent Co-Authors

Yoshihisa SuyamaiD· 3 shared Ayaka Kishimoto· 1 shared Dario La MontagnaiD· 1 shared Davin H. E. SetiamargaiD· 1 shared Elisa RondoniiD· 1 shared Fabio AttorreiD· 1 shared Francesco Buttarazzi· 1 shared Hirotoshi Kasane· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersEvolutionary Biology

Yoshihisa SuyamaORCID

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3 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintSep 24, 2026

Genome-wide evidence for cryptic multi-generational introgression between invasive Bursaphelenchus xylophilus and native B. mucronatus

Yuzuki IKEDA, Naoko Ishikawa, Kenichi Yanagisawa…·Ryoji Shinya

DOI 10.64898/2026.09.18.752818

DNA methylationstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintAug 22, 2026

Nationwide multi-omics profiling of Japanese jack mackerel reveals geographic gut microbiome structuring despite host panmixia

Masaaki Yoshida, Keito Tsunoda, Hirotoshi Kasane…·Davin H. E. Setiamarga

The paper uses multi-omics profiling to show geographic structuring in the gut microbiome of Japanese jack mackerel despite panmictic host genetics.

DOI 10.64898/2026.08.20.745924

multiple speciesbulk RNA-seq

𝕏 PostBluesky

GeneticsTree Genetics & GenomesPeer-reviewedJul 10, 2026

Genetic diversity and conservation insights for the baobab Adansonia suarezensis in northern Madagascar: a whole genome SNP analysis

Onja Hariveloniaina Morilline Razanamaro, Dario La Montagna, Fabio Attorre…·Marilena Marconi

This study analyzes the genetic structure and diversity of A. suarezensis populations using SNP data, revealing genetic differentiation and inbreeding patterns with conservation implications.

1 citation

whole-genome sequencingstatistical model

𝕏 PostBluesky