Author

Ekaterina Avershina

Oslo University HospitalORCID 0000-0001-9935-2804Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Ekaterina Avershina1 paper

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:human· 1

Frequent Co-Authors

Einar Elvbakken BirkelandiD· 2 shared Trine B. RoungeiD· 2 shared Cecilie Bucher-JohannesseniD· 1 shared Paula IstvaniD· 1 shared Torbjørn RognesiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 8 mutual co-author links

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2 shared papersMolecular Biology

Einar Elvbakken BirkelandORCID

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2 papers

Recent·Most cited

CRISPR-Cas immune repertoires as an ecological record of bacterial interactions with mobile genetic elements in the human gut

Ekaterina Avershina, Einar Elvbakken Birkeland, Cecilie Bucher-Johannessen, Trine B. Rounge

The paper constructs a large-scale resource of bacteria-MGE interactions in the human gut microbiome using CRISPR-Cas cassettes and links them to diet and lifestyle factors.

Gut Microbes · Sep 21, 2026Peer-reviewedMolecular Biology

VirMake: a flexible and user-friendly pipeline for viral taxonomic and functional characterisation from shotgun metagenomic sequencing data

Einar Elvbakken Birkeland, Paula Istvan, Ekaterina Avershina, Torbjørn Rognes, Trine B. Rounge

VirMake processes shotgun metagenomic data to identify and characterize viral taxa and functions, showing variability in viral genome richness and taxonomy across environments and protocols.

bioRxiv · Feb 7, 2025 · PreprintBioinformatics