AUTO-TUNE: SELECTING THE DISTANCE THRESHOLD FOR INFERRING HIV TRANSMISSION CLUSTERS
Steven Weaver, Vanessa Dávila‐Conn, Daniel Ji, Hannah Verdonk, Santiago Ávila‐Ríos, Andrew Brown, Joel O. Wertheim, Sergei L. Kosakovsky Pond
The paper introduces a heuristic method to adaptively select a genetic distance threshold for HIV transmission network inference, demonstrating its utility in identifying clusters with different risk factors.
Frontiers in Bioinformatics · Jul 10, 2024Peer-reviewedBioinformatics