Author

Meher K. Prakash

Jawaharlal Nehru Centre for Advanced Scientific ResearchORCID 0000-0002-0091-4158Unclaimed ORCID profile · follow to get notified of new preprints

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Meher K. Prakash1 paper

Biology Disciplines

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Biochemistry· 1 Bioinformatics· 1 Biophysics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:variant effect prediction· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

C. K. SruthiiD· 4 shared Hemalatha Balaram· 1 shared Soutick SahaiD· 1 shared

Activity by Year

2017-2018 · peak 3/yr

Co-Author Collaboration Network

3 top collaborators · 2 mutual co-author links

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4 shared papersBiochemistry

C. K. SruthiORCID

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4 papers

Recent·Most cited

Visualizing Deep Mutational Scan Data

C. K. Sruthi, Hemalatha Balaram, Meher K. Prakash

This paper visualizes deep mutational scan data for TEM-1 β-lactamase to better understand mutation effects through attribute analysis.

bioRxiv · Sep 16, 2018 · PreprintBiochemistry

Viral Complexity: Amino acid co-evolution in viral genomes as a possible metric

C. K. Sruthi, Meher K. Prakash

The paper analyzes amino acid co-evolution in viral genomes to classify viral complexity using network characteristics and finds distinct patterns in different viruses.

bioRxiv · Nov 13, 2017 · PreprintSystems Biology

Deep2Full: Predictive model for complementing phenotypic outcomes in a deep mutational scan using protein sequence and structure information

C. K. Sruthi, Meher K. Prakash

The paper introduces a model that predicts phenotypic outcomes of protein mutations using sequence and structural data, improving prediction accuracy with random mutations over systematic substitutions.

bioRxiv · Nov 10, 2017 · PreprintBioinformatics

Chemotaxis microsimulation: On the gain in nutrient uptake and bacterial cell division with chemotaxis mechanism

Soutick Saha, C. K. Sruthi, Meher K. Prakash

The paper develops a microsimulation model to quantify how chemotaxis affects nutrient uptake and bacterial population growth, finding significant benefits only under nutrient-rich conditions.

bioRxiv · Jan 23, 2017 · PreprintBiophysics