Author

Marc Bierings

Princess Máxima CenterORCID 0000-0002-0192-3080Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Arianne M. BrandsmaiD· 1 shared Cayetano Pleguezuelos‐ManzanoiD· 1 shared Diego Montiel González· 1 shared Dirk ReinhardtiD· 1 shared Eline J.M. BertrumsiD· 1 shared Evangelia AntoniouiD· 1 shared Flavia PeciiD· 1 shared Freek MandersiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Arianne M. BrandsmaORCID

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1 paper

Recent·Most cited

Comprehensive single-cell genome analysis at nucleotide resolution using the PTA Analysis Toolbox

Sjors Middelkamp, Freek Manders, Flavia Peci, Markus J. van Roosmalen, Diego Montiel González, Eline J.M. Bertrums, Inge M. van der Werf, Lucca L. M. Derks, Niels M. Groenen, Mark Verheul, Laurianne Trabut, Cayetano Pleguezuelos‐Manzano, Arianne M. Brandsma, Evangelia Antoniou, Dirk Reinhardt, , Ruben van Boxtel

The paper introduces PTATO, a bioinformatic workflow for detecting somatic mutations in single-cell WGS data using PTA, achieving high sensitivity for base substitutions and indels.

Cell Genomics · Aug 23, 2023Peer-reviewedGenomics