BioinformaticsGenomics Proteomics & BioinformaticsPeer-reviewed
Comprehensive benchmarking with guidelines for analyzing transposable element-derived RNA expression
Jianqi She, Jiadong Wang, Ence Yang
The paper benchmarks 16 teRNA analysis tools using simulated and real datasets, identifies performance trade-offs at different levels, and provides guidelines and a pipeline for best practices.
DOI 10.1093/gpbjnl/qzag044