Author

Yannick Pouliot

Tempus Labs (United States)ORCID 0000-0002-0344-1923Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1 Assay:whole-exome sequencing· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Francisco M. De La VegaiD· 2 shared Aaron M. Smith· 1 shared Aarti VenkatiD· 1 shared Andrew W. CarrolliD· 1 shared Anna VilborgiD· 1 shared Anton D. LoukianoviD· 1 shared Austin P. So· 1 shared Charles K. FisheriD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersBioinformatics

Francisco M. De La VegaORCID

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Author profile →

3 papers

Recent·Most cited

BioinformaticsBioinformatics AdvancesPeer-reviewedJan 1, 2023

A Deep-learning based RNA-seq Germline Variant Caller

Daniel E. Cook, Aarti Venkat, Dennis Yelizarov…·Francisco M. De La Vega

This paper develops a deep-learning based RNA-seq germline variant caller that outperforms existing tools like Platypus and GATK.

16 citations

whole-genome sequencingdeep learning

BioinformaticsbioRxivPreprintFeb 4, 2020

Generating Digital Twins with Multiple Sclerosis Using Probabilistic Neural Networks

Jonathan R. Walsh, Aaron M. Smith, Yannick Pouliot…·Charles K. Fisher

The paper uses a Conditional Restricted Boltzmann Machine to generate digital twins of MS patients, enabling subject-level analysis of disease progression.

40 citations

humanmachine learning (classical)

Genomicsnpj Genomic MedicinePeer-reviewedJan 5, 2018

A Robust Targeted Sequencing Approach For Low Input And Variable Quality DNA From Clinical Samples

Austin P. So, Anna Vilborg, Yosr Bouhlal…·Hanlee P. Ji

This paper introduces a targeted sequencing method for low-quality DNA that reduces PCR bias and improves variant detection in clinical samples.

26 citations

humanwhole-exome sequencing