Author

Nesime Tatbul

Massachusetts Institute of TechnologyORCID 0000-0002-0416-7022Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:DNA methylation· 1 Organism:human· 1 Assay:long-read sequencing· 1 Approach:machine learning (classical)· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Darryl Ho· 1 shared Heng LiiD· 1 shared Jialin DingiD· 1 shared Sanchit MisraiD· 1 shared Saurabh Kalikar· 1 shared Tim KraskaiD· 1 shared Vasimuddin MdiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Darryl Ho

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintDec 22, 2020

LISA: A Case For Learned Index based Acceleration of Biological Sequence Analysis

Darryl Ho, Saurabh Kalikar, Sanchit Misra…·Tim Kraska

The paper introduces LISA, a machine learning-based index for accelerating sequence search in genomics, showing performance improvements over traditional indexes in various case studies.

6 citations

humanplant (other)