Lu Zhang

Deduplication Improves Cost-Efficiency and Yields of De novo Assembly and Binning of Shot-Gun Metagenomes in Microbiome Research

This study shows that removing duplicate reads improves metagenomic assembly and binning yields and reduces computational costs in complex environmental samples.

Ultra-Accurate Classification and Discovery of Functional Protein-Coding Genes from Microbiomes Using FunGeneTyper: an Expandable Deep Learning-Based Framework

FunGeneTyper is a deep learning framework for ultra-accurate classification and discovery of functional genes in microbiomes, outperforming existing methods in multiple environments.