Author

Chendi Wang

University of British ColumbiaORCID 0000-0002-0686-4024Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Approach:deep learning· 1 Research Focus:GWAS / association mapping· 1

Frequent Co-Authors

Bernard NgiD· 2 shared Sara MostafaviiD· 2 shared Alexandra Maslova· 1 shared Chris GaiteriiD· 1 shared Christophe O. BenoistiD· 1 shared Curtis FoxiD· 1 shared David Alan BennettiD· 1 shared Farnush FarhadiiD· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Bernard NgORCID

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2 papers

Recent·Most cited

Cascading Epigenomic Analysis for Identifying Disease Genes from the Regulatory Landscape of GWAS Variants

Bernard Ng, William Casazza, Nam Hee Kim, Chendi Wang, Farnush Farhadi, Shinya Tasaki, David Alan Bennett, Philip L. De Jager, Chris Gaiteri, Sara Mostafavi

CEWAS improves gene detection from GWAS by modeling cascading epigenomic and transcriptomic effects, identifying disease-related genes and novel biological processes.

PLoS Genetics · Nov 22, 2021Peer-reviewedBioinformatics

Learning immune cell differentiation

Alexandra Maslova, Ricardo N. Ramírez, Ke Ma, Hugo Schmutz, Chendi Wang, Curtis Fox, Bernard Ng, Christophe O. Benoist, Sara Mostafavi, the Immunological Genome Project

This paper introduces AI-TAC, a convolutional neural network that infers cell-type-specific chromatin activity from DNA sequences using an ATAC-seq atlas of immune cells.

bioRxiv · Dec 21, 2019 · PreprintGenomics