Author

John Charles O’Horo

Mayo ClinicORCID 0000-0002-0880-4498Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Adam K. Khan· 1 shared Alpesh AminiD· 1 shared Arjun P. AthreyaiD· 1 shared Ashley L. Drews· 1 shared Bert K. LopansriiD· 1 shared Bobbi S. PrittiD· 1 shared Brandon J. WebbiD· 1 shared Brian Anderson· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenomics

Adam K. Khan

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Author profile →

2 papers

Recent·Most cited

Gut Microbiome Signatures During Acute Infection Predict Long COVID

Işın Y. Comba, Ruben A. T. Mars, Lu Yang, Mitchell G. Dumais, Jun Chen, Trena M. Van Gorp, Jonathan J. Harrington, Jason P. Sinnwell, Stephen P. Johnson, LaRinda A. Holland, Adam K. Khan, Efrem S. Lim, Christopher A. Aakre, Arjun P. Athreya, Georg Kurt Gerber, , Purna Kashyap

The paper identifies distinct gut microbiome signatures during acute SARS-CoV-2 infection that predict long COVID, showing microbiome profiles better predict risk than clinical variables.

bioRxiv · Dec 10, 2024 · PreprintGenomics

Descriptive Analysis of SARS-CoV-2 Genomics Data from Ambulatory Patients

Nalini Ambrose, Alpesh Amin, Brian Anderson, Monica M. Bertagnolli, Francis X. Campion, Daniel S. Chow, Ashley L. Drews, Heath Farris, Fraser W. Gaspar, Stephen L. Jones, Tonia M. Korves, Bert K. Lopansri, James M. Musser, Eric Neumann, John Charles O’Horo, , Jennifer Yttri

This paper describes the processing pipeline and findings from SARS-CoV-2 genomics data collected from ambulatory patients treated with neutralizing monoclonal antibodies, showing variant distribution and mutations associated with antibody escape.

medRxiv · May 3, 2023 · PreprintGenetic & Genomic Medicine