Author

Jie Tan

Peking UniversityORCID 0000-0002-0909-2904Unclaimed ORCID profile · follow to get notified of new preprints

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Jie Tan1 paper

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Approach:deep learning· 2 Assay:metagenomics· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Huaiqiu ZhuiD· 2 shared Qian GuoiD· 2 shared Shufang WuiD· 2 shared Xiaoqing JiangiD· 2 shared Zhencheng FangiD· 2 shared Chunhui WangiD· 1 shared Congmin XuiD· 1 shared Mo LiiD· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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2 shared papersBioinformatics

Huaiqiu ZhuORCID

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2 papers

Recent·Most cited

BioinformaticsGigaSciencePeer-reviewedSep 1, 2021

Distinguish virulent and temperate phage-derived sequences in metavirome data with a deep learning approach

Shufang Wu, Zhencheng Fang, Jie Tan…·Huaiqiu Zhu

DeePhage is a deep learning tool that classifies virulent and temperate phage-derived sequences in metavirome data with high accuracy and speed.

110 citationstop 2%

metagenomicsdeep learning

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedAug 10, 2021

Identify phage hosts from metaviromic short reads based on deep learning and Markov chain model

Jie Tan, Zhencheng Fang, Shufang Wu…·Huaiqiu Zhu

HoPhage identifies phage hosts from metavirome short reads using deep learning and a Markov chain model, achieving good performance on short fragments across a wide host range.

28 citations

bacteria (other)metagenomics

𝕏 PostBluesky