Author

Jozef Nosek

Comenius University BratislavaORCID 0000-0002-1020-5451Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Organism:yeast· 3 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Assay:long-read sequencing· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Broňa BrejováiD· 4 shared Tomáš VinařiD· 4 shared Viktória HodorováiD· 4 shared Filip BrázdovičiD· 3 shared Hana LichancováiD· 3 shared Ľubomír TomáškaiD· 3 shared Barbara SivákováiD· 2 shared Martina NeboháčováiD· 2 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersGenomics

Broňa BrejováORCID

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4 papers

Recent·Most cited

Noncanonical chromosomal-end-specific telomeric arrays in naturally telomerase-negative yeasts

Broňa Brejová, Viktória Hodorová, Hana Lichancová, Askar Gafurov, Dominik Bujna, Filip Brázdovič, Filip Červenák, Tomáš Petrík, Eva Hegedűsová, Michaela Jakúbková, Martina Neboháčová, Ľubomír Tomáška, Matthias Sipiczki, Tomáš Vinař, Jozef Nosek

The paper identifies noncanonical telomeric arrays in telomerase-negative yeasts and hypothesizes an ALT mechanism compensates for telomerase loss.

Nucleic Acids Research · May 20, 2026Peer-reviewedMolecular Biology

Reduction of ribosomal expansion segments in yeast species of the Magnusiomyces/Saprochaete clade

Filip Brázdovič, Broňa Brejová, Barbara Siváková, Péter Baráth, Filip Kerák, Viktória Hodorová, Tomáš Vinař, Ľubomír Tomáška, Jozef Nosek

The paper identifies reduced expansion segments in rRNAs of Magnusiomyces/Saprochaete yeasts compared to Saccharomyces cerevisiae, showing independent loss of ESs in multiple lineages without major changes to ribosomal protein inventories.

Genome Biology and Evolution · Aug 9, 2024Peer-reviewedGenomics

Precise Nanopore Signal Modeling Improves Unsupervised Single-Molecule Methylation Detection

Vladimír Boža, Eduard Batmendijn, Peter Perešíni, Viktória Hodorová, Hana Lichancová, Rastislav Rabatin, Broňa Brejová, Jozef Nosek, Tomáš Vinař

The paper improves unsupervised methylation detection in nanopore sequencing by enhancing dynamic time warping algorithms and introducing a new tool, Nadavca.

bioRxiv · Jul 13, 2023 · PreprintBioinformatics

Transcriptome and proteome profiling reveals complex adaptations of Candida parapsilosis cells assimilating hydroxyaromatic carbon sources

Andrea Cillingová, Renáta Tóth, Anna Mojáková, Igor Zeman, Romana Vrzoňová, Barbara Siváková, Péter Baráth, Martina Neboháčová, Zuzana Klepcová, Filip Brázdovič, Hana Lichancová, Viktória Hodorová, Broňa Brejová, Tomáš Vinař, Sofia Mutalová, , Jozef Nosek

This study profiles transcriptome and proteome of Candida parapsilosis assimilating hydroxyaromatic carbon sources, revealing pathway regulation and metabolic connections.

PLoS Genetics · Mar 7, 2022Peer-reviewedGenomics