Author

James Alexander Berkley

Kenya Medical Research InstituteORCID 0000-0002-1236-849XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Assay:metabolomics· 1 Assay:metagenomics· 1 Assay:proteomics· 1

Frequent Co-Authors

Abdoulaye Hama DialloiD· 1 shared Albert KoulmaniD· 1 shared Andrew J. PrendergastiD· 1 shared Ann Sarah WalkeriD· 1 shared Ben Symons CooperiD· 1 shared Benjamin H. JenkinsiD· 1 shared Benson O. SingaiD· 1 shared Charles SandeiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperSystems Biology

Abdoulaye Hama DialloORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintSep 1, 2025

Biological landscape of acute illness in children in sub-Saharan Africa and South Asia

Evans O. Mudibo, Charles Sande, Moses M. Ngari…·James M. Njunge

The paper identifies common and syndrome-specific omics responses to acute illness in children and shows how malnutrition modifies host responses.

DOI 10.1101/2025.09.01.672585

humanproteomics

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GenomicsbioRxivPreprintFeb 10, 2020

Metrics for Public Health Perspective Surveillance of Bacterial Antibiotic Resistance in Low- and Middle-Income Countries

Olga Tosas Auguet, René Niehus, Hyun S. Gweon…·Nicole E Stoesser

The paper develops a metagenomic metric to predict antibiotic resistance in Enterobacterales infections using pooled human faecal samples from LMICs and high-income settings.

2 citations

humanmetagenomics

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