Author

Étienne Decencière

Université Paris Sciences et LettresORCID 0000-0002-1349-8042Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Assay:imaging· 2 Research Focus:benchmarking· 1 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

Anne Vincent‐SalomoniD· 1 shared Beatriz MarcoteguiiD· 1 shared Carine PuppoiD· 1 shared David CarmignaciD· 1 shared Gérard Lacroix· 1 shared Jean‐François Le GalliardiD· 1 shared Léo DechaumetiD· 1 shared Manuel Jorge RodriguesiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Anne Vincent‐SalomonORCID

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2 papers

Recent·Most cited

EcologybioRxivPreprintSep 29, 2026

PlanktonLake-CEREEP- A Freshwater Plankton Image Dataset with Semi-Automated Label Cleaning

Léo Dechaumet, Carine Puppo, David Carmignac…·Jean‐François Le Galliard

This paper introduces a freshwater plankton image dataset with 88,000 images across 43 taxa and presents a CNN-based baseline achieving 93% classification accuracy.

DOI 10.64898/2026.09.24.753096

imagingmachine learning (classical)

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BioinformaticsbioRxivPreprintDec 4, 2023

Democratizing computational pathology: optimized Whole Slide Image representations for The Cancer Genome Atlas

Tristan Lazard, Marvin Lerousseau, Sophie Gardrat…·Thomas Walter

This paper introduces Giga-SSL, a self-supervised method for learning Whole Slide Image representations from The Cancer Genome Atlas data, improving classification performance and enabling efficient analysis.

1 citation

humanimaging

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