HARMONIES: A Hybrid Approach for Microbiome Networks Inference via Exploiting Sparsity
Shuang Jiang, Guanghua Xiao, Andrew Young Koh, Yingfei Chen, Bo Yao, Qiwei Li, Xiaowei Zhan
HARMONIES infers sparse microbiome networks using a zero-inflated negative binomial model and regularization, outperforming existing methods and identifying disease-associated microbial communities.
Frontiers in Genetics · Jun 3, 2020Peer-reviewedBioinformatics