Taxon-in-context reveals ecological individuality in the human gut microbiome
Joverlyn D. Gaudillo, Nicole Astrologo, Francesco Canonaco, Fabio A. Stella, Silvia Barbaresi, Teresa Zelante, Harm Wopereis, Yossi Cohen, Cyril Guyard, Jan Knol, Christophe Lay, Enzo Acerbi
The paper introduces taxon-in-context to capture individualized microbial context in the human gut microbiome, showing that microbes occupy different contexts across individuals and over time, improving recurrence prediction.
bioRxiv · Oct 27, 2026 · PreprintSystems Biology