Author

Harm Wopereis

Danone (Netherlands)ORCID 0000-0002-2103-1442Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Assay:metagenomics· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Christophe LayiD· 1 shared Clara BelzeriD· 1 shared Cyril GuyardiD· 1 shared Diana M. HendrickxiD· 1 shared Enzo AcerbiiD· 1 shared Fabio A. StellaiD· 1 shared Francesco CanonacoiD· 1 shared Jan KnoliD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperSystems Biology

Christophe LayORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Taxon-in-context reveals ecological individuality in the human gut microbiome

Joverlyn D. Gaudillo, Nicole Astrologo, Francesco Canonaco, Fabio A. Stella, Silvia Barbaresi, Teresa Zelante, Harm Wopereis, Yossi Cohen, Cyril Guyard, Jan Knol, Christophe Lay, Enzo Acerbi

The paper introduces taxon-in-context to capture individualized microbial context in the human gut microbiome, showing that microbes occupy different contexts across individuals and over time, improving recurrence prediction.

bioRxiv · Oct 27, 2026 · PreprintSystems Biology

Identification of potential inflammation markers for outgrowth of cow's milk allergy

Diana M. Hendrickx, Mengyichen Long, PRESTO study team, Harm Wopereis, Renate G.V.D. Molen, Clara Belzer

The paper identifies potential inflammation markers in saliva samples of children with cow's milk allergy (CMA) that correlate with resolution or persistence of the allergy.

PLoS ONE · Sep 10, 2025Peer-reviewedImmunology