Integrating the ENCODE blocklist for machine learning quality control of ChIP-seq data with seqQscorer
Steffen Albrecht, Clarissa Krämer, Philipp Röchner, Johannes U. Mayer, Franz Rothlauf, Miguel Angel Andrade-Navarro, Maximilian Sprang
The paper improves seqQscorer by integrating the ENCODE blocklist to enhance ChIP-seq quality assessment accuracy and efficiency.
bioRxiv · May 12, 2025 · PreprintBioinformatics