Author

Bonnie V. Dougherty

University of VirginiaORCID 0000-0002-1454-4899Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Assay:proteomics· 1 Approach:statistical model· 1

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Jason A. PapiniD· 1 shared Matthew L. JenioriD· 1 shared Thomas J. MoutinhoiD· 1 shared

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2020-2020 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperSystems Biology

Jason A. PapinORCID

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1 paper

Recent·Most cited

Systems BiologyPLoS Computational BiologyPeer-reviewedApr 16, 2020

Transcriptome-guided parsimonious flux analysis improves predictions with metabolic networks in complex environments

Matthew L. Jenior, Thomas J. Moutinho, Bonnie V. Dougherty, Jason A. Papin

RIPTiDe improves metabolic predictions by integrating transcriptomic data with flux minimization to identify cost-effective metabolic pathways in bacteria without requiring knowledge of growth conditions.

87 citations

bacteria (other)metagenomics

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