Author

Maarten Pater

Amsterdam UMC Location University of AmsterdamORCID 0000-0002-1493-5670Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:human· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Menno D. de JongiD· 2 shared Björn F. Koel· 1 shared Colin A. Russell· 1 shared Frank van Someren Gréve· 1 shared René M. Vigeveno· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

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2 shared papersBioinformatics

Menno D. de JongORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintDec 3, 2025

MirAge, a novel Matrix Analyzer for fast DNA classification

Maarten Pater, Menno D. de Jong

MirAge is a tool for fast and accurate DNA and RNA classification, combining databases and running on HPC environments with customizable settings.

DOI 10.64898/2025.12.02.691787

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintJan 2, 2019

Disparate evolution of virus populations in upper and lower airways of mechanically ventilated patients

Björn F. Koel, Frank van Someren Gréve, René M. Vigeveno…·Menno D. de Jong

This study compares genetic variation of influenza virus in upper and lower respiratory tracts of ventilated patients, finding divergent evolutionary trajectories in different airway compartments.

DOI 10.1101/509901

humanbulk RNA-seq

𝕏 PostBluesky