Author

Isaac N. Shaffer

Northern Arizona UniversityORCID 0000-0002-1514-2242Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:bacteria (other)· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Kuei-Ling C. HsuiD· 1 shared Robert K. ErnstiD· 1 shared Talima PearsoniD· 1 shared Tara FurstenauiD· 1 shared Viacheslav Y. FofanoviD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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1 shared paperBioinformatics

Kuei-Ling C. HsuORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 23, 2026

MetaTracer: A nucleotide alignment-based framework for high-resolution taxonomic and transcript assignment in metatranscriptomic data

Tara Furstenau, Isaac N. Shaffer, Kuei-Ling C. Hsu…·Viacheslav Y. Fofanov

MetaTracer assigns taxonomic and gene expression to metatranscriptomic reads using nucleotide alignment, achieving high accuracy in simulated and real datasets.

DOI 10.64898/2026.02.20.707109

bacteria (other)metagenomics

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