Author

Liliane Santana Oliveira

Universidade Tecnológica Federal do ParanáORCID 0000-0002-1538-8541Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

Alexandre Rossi PaschoaliD· 2 shared Alisson Gaspar ChiquittoiD· 2 shared Douglas Silva DominguesiD· 1 shared Francismar Corrêa Marcelino‐GuimarãesiD· 1 shared Lucas Otávio L. SilvaiD· 1 shared Mark BashamiD· 1 shared Pedro H. BugattiiD· 1 shared Priscila T. M. SaitoiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersBioinformatics

Alexandre Rossi PaschoalORCID

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3 papers

Recent·Most cited

COMPARATIVE GENOMIC ANALYSIS OF CORE AND ACCESSORY GENES IN RUST FUNGI REVEALS PATHOGENICITY-ASSOCIATED GENE FAMILIES IN Phakopsora pachyrhizi

Vinícius Delgado da Rocha, Liliane Santana Oliveira, Francismar Corrêa Marcelino‐Guimarães

bioRxiv · Jul 9, 2026 · PreprintGenomics

Generative Approaches for Nucleotide Sequences to Enhance Non-coding RNA Classification

Alisson Gaspar Chiquitto, Liliane Santana Oliveira, Pedro H. Bugatti, Priscila T. M. Saito, Mark Basham, Roberto Tadeu Raittz, Alexandre Rossi Paschoal

This study introduces GENNUS, a generative approach using GANs and SMOTE to improve ncRNA classification by addressing class imbalance through synthetic data generation.

NAR Genomics and Bioinformatics · Mar 29, 2025Peer-reviewedBioinformatics

Impact of sequencing technologies on long non-coding RNA computational identification

Alisson Gaspar Chiquitto, Lucas Otávio L. Silva, Liliane Santana Oliveira, Douglas Silva Domingues, Alexandre Rossi Paschoal

This study evaluates the performance of lncRNA prediction tools on long-read sequencing data and identifies challenges in their application.

IEEE International Conference on Bioinformatics and Biomedicine (BIBM) · Dec 6, 2022Peer-reviewedBioinformatics