Author

Vladimir L. Boginski

University of Central FloridaORCID 0000-0002-1571-0481Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metabolomics· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:graph neural network· 1 Research Focus:metabolism & bioenergetics· 1

Frequent Co-Authors

Alexander SemenoviD· 2 shared Alexey V. MelnikiD· 2 shared Elizabeth A. ColeriD· 2 shared Abubaker PataniD· 1 shared Alexander A Aksenov· 1 shared Alexander A. AksenoviD· 1 shared Ali LotfiiD· 1 shared Andrew RobertsiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersBioinformatics

Alexander SemenovORCID

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2 papers

Recent·Most cited

Real-time repository-scale spectral search and global molecular networking with HNSW-MS

Alexander Semenov, Andrew Roberts, Elizabeth Coler, Samarth Gupta, Evguenia Kopylova, Alexey V. Melnik, Vladimir L. Boginski, Alexander A Aksenov

HNSW-MS enables fast and accurate spectral search in large metabolomics repositories, allowing rapid integration of new spectra into global molecular networks.

bioRxiv · Aug 22, 2026 · PreprintBioinformatics

Ordering molecular diversity in untargeted metabolomics via molecular community networking

Elizabeth A. Coler, Alexey V. Melnik, Ali Lotfi, Dana Moradi, Ben Ahiadu, Paulo Wender Portal Gomes, Abubaker Patan, Vincent Charron‐Lamoureux, Pieter C. Dorrestein, Stephen Barnes, Vladimir L. Boginski, Alexander Semenov, Alexander A. Aksenov

This paper introduces molecular community networking to organize metabolite data, revealing hidden connections and discovering novel dipeptide-conjugated bile acids.

Cell Reports Methods · Jun 2, 2026Peer-reviewedBiochemistry