Author

Juan A. Ferrer-Bonsoms

Universidad de NavarraORCID 0000-0002-1588-2195Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Ana Anorbe· 1 shared Ane San MartíniD· 1 shared Ángel RubioiD· 1 shared César Lobato‐FernándeziD· 1 shared Danel Olaverri-MendizabaliD· 1 shared Fernando CarazoiD· 1 shared Idoia OchoaiD· 1 shared Joseba Sancho-ZamoraiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Ana Anorbe

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintApr 11, 2024

DeepRBP: A novel deep neural network for inferring splicing regulation

Joseba Sancho-Zamora, Juan A. Ferrer-Bonsoms, Danel Olaverri-Mendizabal…·Idoia Ochoa

DeepRBP identifies RNA-binding protein-gene regulation pairs using a deep learning framework and explainability module, validated on known interactions.

DOI 10.1101/2024.04.11.589004

deep learninggene regulatory network inference

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BioinformaticsbioRxivPreprintJul 17, 2023

A Systematic Identification of RBPs Driving Aberrant Splicing in Cancer

Marian Gimeno, César Lobato‐Fernández, Ane San Martín…·Juan A. Ferrer-Bonsoms

This paper develops an algorithm to identify RBPs associated with splicing changes in cancer using CLIP-seq and TCGA data, finding novel RBP-cancer type relationships.

DOI 10.1101/2023.07.17.549307

humanbulk RNA-seq

𝕏 PostBluesky