Vincenzo Bonnici

EasyCircR detects and reconstructs circRNA-miRNA-mRNA regulatory networks through post-transcriptional analysis and visualization.

DiGAS improves genetic disease diagnosis by directly analyzing gene-level SNP significance without relying on GWAS, achieving high accuracy in Alzheimer's disease classification.

Stardust improves spatial transcriptomics clustering by integrating spatial and transcriptomic data through modularity optimization, achieving more stable and biologically coherent results.

GRAFIMO scans transcription factor binding sites in pangenome variation graphs, identifying variant-specific binding events that are missed or altered in reference genomes.