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Google (United States)ORCID 0000-0002-1654-5684Unclaimed ORCID profile · follow to get notified of new preprints
2 papers
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Mobin Asri, Pi-Chuan Chang, Juan Carlos Mier…·Kishwar Shafin
This paper introduces pangenome-aware DeepVariant, a variant caller that improves accuracy by using a pangenome reference, outperforming linear-reference-based DeepVariant by up to 25.5%.
Akosua Busia, George E. Dahl, Clara Fannjiang…·Mark A. DePristo
A convolutional network trained on 16S reads from 13,838 species reaches within 2.0% of training-set Bayes-optimal species accuracy and usually beats k-mer, alignment and Kraken2 on held-out-species genera.