Author

Guoxian Yu

Shandong UniversityORCID 0000-0002-1667-6705Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:benchmark study· 2 Research Focus:benchmarking· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Research Focus:imputation· 1

Frequent Co-Authors

Hanwen LuoiD· 2 shared Jun WangiD· 2 shared Liliang LiuiD· 2 shared Xuerui Zhang· 2 shared Zhijin XING· 2 shared Bin LiuiD· 1 shared Carlotta Domeniconi· 1 shared Geng Li· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersGenomics

Hanwen LuoORCID

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3 papers

Recent·Most cited

GPBench: A benchmark framework for genomic prediction

Xiaowei Zhang, Hanwen Luo, Geng Li, Xuerui Zhang, Siying Wang, Liliang Liu, Maozu Guo, Qiaoyu Tan, Carlotta Domeniconi, Jian Chen, Jun Wang, Guoxian Yu

GPBench provides a standardized benchmark framework for genomic prediction, evaluating 21 models across 16 species and offering tools for analysis and comparison.

bioRxiv · Nov 4, 2026 · PreprintGenomics

STAnalyzer: Transparent Spatial Transcriptomics Analysis via an Agentic Architecture

Hanwen Luo, Liliang Liu, Zhijin XING, Xinlu Li, Xuerui Zhang, Wei Du, Bin Liu, Jun Wang, Guoxian Yu

STAnalyzer automates spatial transcriptomics analysis through a multi-agent framework, enabling end-to-end processing and hypothesis generation with transparency and robustness.

bioRxiv · Apr 9, 2026 · PreprintBioinformatics

DANCE 2.0: Transforming single-cell analysis from black box to transparent workflow

Jiayuan Ding, Zhijin XING, Yixin Wang, Renming Liu, Sheng Liu, Zhi Huang, Wenzhuo Tang, Yuying Xie, James Zou, Xiaojie Qiu, Jian Ma, Guoxian Yu, Jiliang Tang

DANCE 2.0 automates and interprets single-cell preprocessing by recommending optimal pipelines for various tasks, improving performance across six major analyses.

bioRxiv · Jul 17, 2025 · PreprintBioinformatics