Author

William Thomas Gregory

Oregon Health & Science UniversityORCID 0000-0002-1739-2608Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:human· 1

Frequent Co-Authors

Alan J. WolfeiD· 2 shared Lisa KarstensiD· 2 shared Carter HoffmaniD· 1 shared Damien A. FairiD· 1 shared Holly M. Simon· 1 shared Ian FieldsiD· 1 shared Jonathan G. BrauniD· 1 shared Mark J. Asquith· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Alan J. WolfeORCID

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2 papers

Recent·Most cited

BioinformaticsmSystemsPeer-reviewedSep 14, 2021

Species level resolution of female bladder microbiota from 16S rRNA amplicon sequencing

Carter Hoffman, Nazema Y. Siddiqui, Ian Fields…·Lisa Karstens

This study shows species-level identification of bladder bacteria is possible using 16S rRNA amplicon sequencing by optimizing reference databases and variable regions.

39 citations

humanmetagenomics

𝕏 PostBluesky

BioinformaticsmSystemsPeer-reviewedJun 3, 2019

Controlling for contaminants in low biomass 16S rRNA gene sequencing experiments

Lisa Karstens, Mark J. Asquith, Sean Davin…·Shannon K. McWeeney

This study evaluates two computational methods for removing contaminants in low biomass 16S rRNA gene sequencing, finding that Decontam consistently outperforms SourceTracker in contaminant removal.

327 citationstop 1%

metagenomicsstatistical model

𝕏 PostBluesky