Author

Holly M. Simon

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Organism:human· 1

Frequent Co-Authors

Adrienne B. NarroweiD· 1 shared Alan J. WolfeiD· 1 shared Alexander J. ProbstiD· 1 shared Alexander SczyrbaiD· 1 shared Annegret KohleriD· 1 shared Antônio Pedro CamargoiD· 1 shared Armand SéguiniD· 1 shared Ashley L. ShadeiD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperGenomics

Adrienne B. NarroweORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

A five-fold expansion of the global RNA virome reveals multiple new clades of RNA bacteriophages

Uri Neri, Yuri I. Wolf, Simon Roux, Antônio Pedro Camargo, Benjamin Lee, Darius Kazlauskas, I. Min Chen, Natalia Ivanova, Lisa Zeigler Allen, David Páez-Espino, Donald A. Bryant, Devaki Bhaya, Adrienne B. Narrowe, Alexander J. Probst, Alexander Sczyrba, , Vincent J. Denef

The paper expands the global RNA virome by five-fold, identifying new clades of RNA bacteriophages and revealing novel virus-host interactions.

Cell · Sep 28, 2022Peer-reviewedGenomics

Species level resolution of female bladder microbiota from 16S rRNA amplicon sequencing

Carter Hoffman, Nazema Y. Siddiqui, Ian Fields, William Thomas Gregory, Holly M. Simon, Michael A. Mooney, Alan J. Wolfe, Lisa Karstens

This study shows species-level identification of bladder bacteria is possible using 16S rRNA amplicon sequencing by optimizing reference databases and variable regions.

mSystems · Sep 14, 2021Peer-reviewedBioinformatics