Yichun Xie

Single-cell analyses reveal scyphozoan conserved and specific genes contribution during tissue regeneration in two jellyfish

This study uses single-cell RNA sequencing to analyze tissue regeneration in two jellyfish species, identifying conserved and lineage-specific genes involved in regeneration processes.

Chromosomal-level reference genome and microRNAs of the ricefield flatsedge Cyperus iria

The paper presents a chromosomal-level genome assembly and microRNA annotation for Cyperus iria, revealing genome duplication and providing resources for weed control research.

Response of protein coding genes and microRNAs to temperature changes in four insect species

This study examines sex-specific gene and microRNA expression responses to temperature changes in four Drosophila species, finding greater male bias at the same temperature and more female differentially expressed genes with temperature shifts.

Chromosome-level de novo assembly of Coprinopsis cinerea A43mut B43mut pab1-1 #326 and genetic variant identification of mutants using Nanopore MinION sequencing

This paper presents a chromosome-level genome assembly of Coprinopsis cinerea using Nanopore sequencing and identifies genetic variants in mutants.

Modified recipe to inhibit GSK-3 for the living fungal biomaterial manufacture

This paper demonstrates that inhibiting GSK-3 kinase activity suppresses fruiting body formation in fungal mycelium, offering a biochemical method to control mycelium growth for biomaterial applications.

Transcriptional profiling elucidates the essential role of glycogen synthase kinase 3 to fruiting body formation in Coprinopsis cinerea

This study uses RNA-Seq to show that GSK3 inhibition in Coprinopsis cinerea disrupts fruiting body formation by altering gene expression related to metabolism and cellular processes.