Author

Brent Vadopalas

University of WashingtonORCID 0000-0002-1791-2095Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Developmental Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Assay:proteomics· 2 Assay:bulk RNA-seq· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Steven RobertsiD· 4 shared Emma Timmins‐SchiffmaniD· 2 shared Aparna Natarajan· 1 shared Benoït Eudeline· 1 shared Cristian Gallardo‐EscárateiD· 1 shared Delaney Lawson· 1 shared Erich B. JaegeriD· 1 shared Frederick W. GoetziD· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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4 shared papersGenomics

Steven RobertsORCID

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4 papers

Recent·Most cited

Triploid Pacific oysters exhibit stress response dysregulation and elevated mortality following marine heatwaves

Matthew N. George, Olivia Cattau, Mollie A. Middleton, Delaney Lawson, Brent Vadopalas, Mackenzie R. Gavery, Steven Roberts

This study shows triploid Pacific oysters have higher mortality and stress response dysregulation than diploids during marine heatwaves.

Global Change Biology · Jul 18, 2023Peer-reviewedGenomics

Dynamic DNA methylation contributes to carryover effects and beneficial acclimatization in geoduck clams

Hollie M. Putnam, Shelly A. Trigg, Samuel J. White, Laura H. Spencer, Brent Vadopalas, Aparna Natarajan, Jonathan Hetzel, Erich B. Jaeger, Jonathan Soohoo, Cristian Gallardo‐Escárate, Frederick W. Goetz, Steven Roberts

This study shows that DNA methylation changes in geoduck clams under different pH conditions lead to long-term phenotypic effects and acclimatization.

bioRxiv · Jun 24, 2022 · PreprintGenomics

Temporal proteomic profiling reveals insight into critical developmental processes and temperature-influenced physiological response differences in a bivalve mollusc

Shelly A. Wanamaker, Kaitlyn Mitchell, Rhonda Elliott Thompson, Benoït Eudeline, Brent Vadopalas, Emma Timmins‐Schiffman, Steven Roberts

The paper profiles proteomic changes during oyster metamorphosis under different temperatures, identifying time- and temperature-dependent protein abundance patterns and their physiological implications.

BMC Genomics · Oct 19, 2020Peer-reviewedDevelopmental Biology

Dynamic Response in the Larval Geoduck Clam Proteome to Elevated pCO2

Emma Timmins‐Schiffman, José M. Guzmán, Rhonda Elliott, Brent Vadopalas, Steven Roberts

This study examines how elevated CO2 levels affect the proteome of geoduck clam larvae, revealing altered protein abundance and developmental delays under low pH conditions.

bioRxiv · Apr 18, 2019 · PreprintMolecular Biology