Author

Anthony P. Farrell

University of British ColumbiaORCID 0000-0002-1822-717XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Assay:metabolomics· 1 Organism:mouse· 1 Organism:rat· 1

Frequent Co-Authors

Aimee Lee S. HoudeiD· 2 shared David A. PattersoniD· 2 shared Kristina M. MilleriD· 2 shared Oliver P. GüntheriD· 2 shared Scott G. HinchiD· 2 shared Shaorong LiiD· 2 shared Arash AkbarzadehiD· 1 shared Chris M. WoodiD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersGenomics

Aimee Lee S. HoudeORCID

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3 papers

Recent·Most cited

PhysiologybioRxivPreprintJul 14, 2025

A decision matrix to better identify repeatable physiological variation within individuals

Yangfan Zhang, Chris M. Wood, Colin J. Brauner, Anthony P. Farrell

The paper introduces PRAM, a decision matrix to distinguish individual physiological variation from experimental noise, showing aerobic metrics are more repeatable than non-aerobic ones in fish.

DOI 10.1101/2025.07.14.664826

metabolomicsstatistical model

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GenomicsJournal of Experimental BiologyPeer-reviewedJan 1, 2019

Salmonid gene expression biomarkers indicative of physiological responses to changes in salinity, temperature, but not dissolved oxygen

Aimee Lee S. Houde, Arash Akbarzadeh, Oliver P. Günther…·Kristina M. Miller

The paper identifies gene expression biomarkers in Chinook salmon that respond to salinity and temperature changes but not dissolved oxygen, under multi-stressor conditions.

62 citationstop 5%

humanbulk RNA-seq

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GenomicsConservation PhysiologyPeer-reviewedJan 1, 2019

Discovery and validation of candidate smoltification gene expression biomarkers across multiple species and ecotypes of Pacific salmonids

Aimee Lee S. Houde, Oliver P. Günther, Jeffrey Strohm…·Kristina M. Miller

The paper identifies and validates gene expression biomarkers for smoltification across multiple salmonid species and ecotypes using microarray and qPCR analyses.

50 citationstop 3%

humanmouse

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