Author

Carlos E. Riquelme

Universidad de AntofagastaORCID 0000-0002-1865-4147Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:bacteria (other)· 3 Assay:whole-genome sequencing· 2 Approach:biophysical modeling· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Nicole T. CavanaughiD· 3 shared Veronica G. Godoy· 3 shared Yunrong ChaiiD· 3 shared André O. HudsoniD· 2 shared Girish KumariD· 2 shared Marcello Twahirwa· 2 shared Matteo Couto Frignani· 2 shared Nathan Thewedros· 2 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Nicole T. CavanaughORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Understanding the genetic diversity of bacteria isolated from across the Atacama Desert

Nicole T. Cavanaugh, Alicyn Reverdy Pearson, Elliot Ingraham, Elizabeth A. Amorelli, Austen L. Herlihy, Nathan Thewedros, Matteo Couto Frignani, Marcello Twahirwa, Carlos E. Riquelme, Yunrong Chai, Veronica G. Godoy

The paper characterizes bacterial diversity and adaptive traits in the Atacama Desert using 16S rRNA sequencing and whole genome sequencing of isolates.

bioRxiv · Aug 25, 2025 · PreprintMicrobiology

Whole-Genome Sequencing of a Janthinobacterium sp. Isolated from the Patagonian Desert

Nicole T. Cavanaugh, Girish Kumar, Alicyn Reverdy, Julia Colbert, Carlos E. Riquelme, André O. Hudson, Yunrong Chai, Veronica G. Godoy

The paper reports whole-genome sequencing of a Janthinobacterium sp. isolate from Patagonian soil, identifying biosynthetic gene clusters including violacein production.

Microbiology Resource Announcements · Oct 9, 2024Peer-reviewedGenomics

Whole-Genome Sequencing of Three Extremophile Bacillus sp. Strains Isolated from the Atacama Desert

Nicole T. Cavanaugh, Girish Kumar, Matteo Couto Frignani, Nathan Thewedros, Marcello Twahirwa, Carlos E. Riquelme, André O. Hudson, Yunrong Chai, Veronica G. Godoy

The paper sequences the genomes of three Bacillus sp. strains from the Atacama Desert to study their survival mechanisms in extreme environments.

bioRxiv · Feb 11, 2024 · PreprintGenomics