Author

Wei Wei

Pennsylvania State UniversityORCID 0000-0002-2024-7233Unclaimed ORCID profile · follow to get notified of new preprints

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Wei Wei9 papers · Centre National de la Recherche Scientifique

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:database / resource· 1 Approach:matrix factorization· 1 Research Focus:software / tool· 1

Frequent Co-Authors

David KoslickiiD· 2 shared Andrew Millward· 1 shared Chunyu MaiD· 1 shared Judith S. Rodriguez· 1 shared Mahmudur Rahman HeraiD· 1 shared Shaopeng LiuiD· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

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2 shared papersBioinformatics

David KoslickiORCID

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2 papers

Recent·Most cited

Fast, lightweight, and accurate metagenomic functional profiling using FracMinHash sketches

Mahmudur Rahman Hera, Shaopeng Liu, Wei Wei, Judith S. Rodriguez, Chunyu Ma, David Koslicki

This paper introduces fmh-funprofiler, a fast and lightweight metagenomic functional profiler using FracMinHash sketches, showing improved purity and speed compared to alignment-based methods.

bioRxiv · Nov 6, 2023 · PreprintBioinformatics

Finding phylogeny-aware and biologically meaningful averages of metagenomic samples: L2UniFrac

Wei Wei, Andrew Millward, David Koslicki

The paper introduces L2UniFrac, a modified UniFrac metric that allows for the computation of biologically meaningful averages of metagenomic samples.

Bioinformatics · Jun 1, 2023Peer-reviewedBioinformatics