Author

Abraham A. Shaked

University of PennsylvaniaORCID 0000-0002-2162-095XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Christopher D. BrowniD· 2 shared Daniel James RaderiD· 2 shared Kim Marie OlthoffiD· 2 shared Alessandra ChesiiD· 1 shared Andrea M. Berrido· 1 shared Andrew D. WellsiD· 1 shared Bao‐Li LozaiD· 1 shared Benjamin F. VoightiD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Christopher D. BrownORCID

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2 papers

Recent·Most cited

Genetic & Genomic MedicineThe American Journal of Human GeneticsPeer-reviewedFeb 1, 2026

Expanded Chromatin Accessibility Mapping Explains Genetic Variation Associated with Complex Traits in Liver

Brandon M. Wenz, Max F. Dudek, Shweta Ramdas…·Benjamin F. Voight

The paper integrates chromatin accessibility data with GWAS to identify regulatory mechanisms underlying blood lipid traits, finding 20% of signals lack proposed mechanisms.

3 citationstop 2%

humanATAC-seq

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GeneticsThe American Journal of Human GeneticsPeer-reviewedJun 13, 2019

Genetic And Epigenetic Fine Mapping Of Complex Trait Associated Loci In The Human Liver

Minal Çalışkan, Elisabetta Manduchi, H. Shanker Rao…·Christopher D. Brown

The paper fine-maps 77 GWAS loci in the human liver by integrating epigenetic and gene expression data to understand genetic and epigenetic regulation of gene expression.

60 citations

humanbulk RNA-seq

𝕏 PostBluesky