Author

Carmela Gissi

Institute of Biomembranes, Bioenergetics and Molecular BiotechnologiesORCID 0000-0002-2269-079XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 4 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Approach:statistical model· 3 Organism:virus· 3 Approach:experimental assay· 2 Research Focus:phylogenetics / evolution· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Matteo ChiaraiD· 4 shared David Stephen HorneriD· 3 shared Graziano PesoleiD· 3 shared Alessia CarianiiD· 1 shared Alessio De BiaseiD· 1 shared Alessio IannucciiD· 1 shared Alice B. DennisiD· 1 shared Alice MinottoiD· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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4 shared papersGenomics

Matteo ChiaraORCID

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics

Ann M. Mc Cartney, Giulio Formenti, Alice Mouton, Diego N. De Panis, Luísa S. Marins, Henrique G. Leitão, Genevieve Diedericks, Joseph Kirangwa, Marco Morselli, Judit Salces-Ortiz, Nuria Escudero, Alessio Iannucci, Chiara Natali, Hannes Svardal, Rosa Fernández, , Zophonías Oddur Jónsson

The paper describes the European Reference Genome Atlas (ERGA) pilot project, which tests a decentralized model for producing high-quality reference genomes across 98 European species.

npj Biodiversity · Sep 17, 2024Peer-reviewedGenomics

Evolutionary Insights from the Mitochondrial Genome of Oikopleura dioica: Sequencing Challenges, RNA Editing, Gene Transfers to the Nucleus, and tRNA Loss

Yael Klirs, Maria Novosolov, Carmela Gissi, Rade Garić, Tal Pupko, Thomas Stach, Dorothée Huchon

This study sequences and annotates the mitochondrial genome of Oikopleura dioica, revealing RNA editing, gene transfers to the nucleus, and tRNA losses, while highlighting sequencing challenges.

Genome Biology and Evolution · Aug 20, 2024Peer-reviewedEvolutionary Biology

Unsupervised classification of SARS-CoV-2 genomic sequences uncovers hidden genetic diversity and suggests an efficient strategy for genomic surveillance

Matteo Chiara, David Stephen Horner, Erika Ferrandi, Carmela Gissi, Graziano Pesole

This study uses unsupervised clustering of SARS-CoV-2 genomic sequences to reveal hidden genetic diversity and proposes an automated framework for improved genomic surveillance.

bioRxiv · Jun 23, 2021 · PreprintGenomics

Comparative genomics provides an operational classification system and reveals early emergence and biased spatio-temporal distribution of SARS-CoV-2

Matteo Chiara, David Stephen Horner, Carmela Gissi, Graziano Pesole

This study introduces a classification system for SARS-CoV-2 genomes, identifies 12 clusters and 4 super-clusters, and estimates the virus's emergence as early as 2019.

bioRxiv · Jun 26, 2020 · PreprintGenomics

Comparative genomics suggests limited variability and similar evolutionary patterns between major clades of SARS-Cov-2

Matteo Chiara, David Stephen Horner, Carmela Gissi, Graziano Pesole

The paper analyzes SARS-CoV-2 genome sequences to determine if geographic clades show distinct evolutionary patterns, finding no evidence of adaptive evolution in protein-coding genes.

bioRxiv · Mar 30, 2020 · PreprintGenomics