Author

Dorit S. Hochbaum

University of California, BerkeleyORCID 0000-0002-2498-0512Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:optimal transport· 1

Frequent Co-Authors

Damian WójtowicziD· 2 shared Rebecca Sarto Basso· 2 shared Yoo-Ah Kim· 2 shared Fabio Vadin· 1 shared Fabio VandiniD· 1 shared Itay Sason· 1 shared Mark D.M. LeisersoniD· 1 shared Roded SharaniD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersBioinformatics

Damian WójtowiczORCID

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2 papers

Recent·Most cited

BioinformaticsGenome MedicinePeer-reviewedMay 29, 2020

Network-based approaches elucidate differences within APOBEC and clock-like signatures in breast cancer

Yoo-Ah Kim, Damian Wójtowicz, Rebecca Sarto Basso…·Teresa M. Przytycka

The paper identifies functional pathways associated with mutational signatures in breast cancer, revealing differences in the etiology of APOBEC and clock-like signatures.

26 citations

humanwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 22, 2019

Identifying Drug Sensitivity Subnetworks with NETPHIX

Yoo-Ah Kim, Rebecca Sarto Basso, Damian Wójtowicz…·Teresa M. Prztycka

NETPHIX identifies mutated subnetworks associated with drug response by leveraging network properties and integer linear programming, revealing novel gene modules linked to MEK1/2 inhibitor sensitivity.

3 citations

humanwhole-genome sequencing

𝕏 PostBluesky