Author

Dibakar Sigdel

Quantum Genomics (France)ORCID 0000-0002-2599-1192Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:multiome· 2 Assay:proteomics· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Namuna PandayiD· 3 shared Aarushi VermaiD· 1 shared Anirudh N. ErankiiD· 1 shared Ding WangiD· 1 shared Irsyad AdamiD· 1 shared Joseph Ramirez· 1 shared Peipei PingiD· 1 shared Wei WangiD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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3 shared papersBioinformatics

Namuna PandayORCID

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3 papers

Recent·Most cited

A Physics-Inspired Classical Digital Twin of the Cell: A Composite Multi-Clock Port-Hamiltonian Neural Network Learned from Multi-Omic Circadian Data

Dibakar Sigdel, Namuna Panday

The paper develops a physics-inspired digital twin of the cell using a multi-clock port-Hamiltonian neural network trained on multi-omic circadian data, showing aggregate phase lag agreement but no per-gene correlation.

bioRxiv · Aug 5, 2026 · PreprintCell Biology

BioPhasor: Decoding Cellular State Tensors from Multi-Omics Phasor Dynamics for Quantum Ready Systems Biology

Dibakar Sigdel, Namuna Panday

The paper introduces BioPhasor, a framework that models cellular states using phasor dynamics and multi-omics data, showing improved performance in cell-cycle and circadian analysis.

bioRxiv · Jul 22, 2026 · PreprintBioinformatics

Data-driven insights into the association between oxidative stress and calcium-regulating proteins in cardiovascular disease.

Namuna Panday, Dibakar Sigdel, Irsyad Adam, Joseph Ramirez, Aarushi Verma, Anirudh N. Eranki, Wei Wang, Ding Wang, Peipei Ping

The paper develops a data science pipeline to analyze interactions between Ca2+-regulating proteins and cardiovascular diseases, identifying associations with oxidative stress and cardiac arrhythmias.

Antioxidants · Nov 20, 2024Peer-reviewedBioinformatics