Author

Zülal Bingöl

Bilkent UniversityORCID 0000-0002-2828-9665Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Can AlkaniD· 2 shared Adrian Tkachenko· 1 shared Akshat Prasanna· 1 shared Alex ZelikovskyiD· 1 shared Arda İçöziD· 1 shared Ayotomiwa Ezekiel AdeniyiiD· 1 shared Mohammed AlseriD· 1 shared Mohammed Nayeem Uddin· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Can AlkanORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

KENT: Fast Pathogen Screening with NVIDIA Jetson Cluster in Resource-Constrained Areas

Arda İçöz, Ricardo Román-Brenes, Zülal Bingöl, Can Alkan

KENT enables fast metagenomic pathogen screening on low-memory hardware using NVIDIA Jetson Nano clusters, achieving speedups while maintaining accuracy comparable to desktop-based methods.

bioRxiv · Oct 8, 2026 · PreprintBioinformatics

FASTR: Reimagining FASTQ via Compact Image-inspired Representation

Adrian Tkachenko, Sepehr Salem, Ayotomiwa Ezekiel Adeniyi, Zülal Bingöl, Mohammed Nayeem Uddin, Akshat Prasanna, Alex Zelikovsky, Serghei Mangul, Can Alkan, Mohammed Alser

FASTR is a new format for storing sequencing data that reduces file size and improves processing speed compared to FASTQ.

bioRxiv · Jan 23, 2026 · PreprintBioinformatics