Author

Serghei Mangul

Ştefan cel Mare University of SuceavaORCID 0000-0003-1453-1729Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Serghei Mangul4 papers

Biology Disciplines

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Bioinformatics· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1

Frequent Co-Authors

Keith MitchelliD· 2 shared Adrian Tkachenko· 1 shared Akshat Prasanna· 1 shared Alex ZelikovskyiD· 1 shared Amanda Freise· 1 shared Angela Ka-Mei LamiD· 1 shared Ayotomiwa Ezekiel AdeniyiiD· 1 shared Benjamin Statz· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersBioinformatics

Keith MitchellORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 23, 2026

FASTR: Reimagining FASTQ via Compact Image-inspired Representation

Adrian Tkachenko, Sepehr Salem, Ayotomiwa Ezekiel Adeniyi…·Mohammed Alser

FASTR is a new format for storing sequencing data that reduces file size and improves processing speed compared to FASTQ.

DOI 10.64898/2026.01.22.701172

whole-genome sequencinglong-read sequencing

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BioinformaticsPLoS BiologyPeer-reviewedJun 20, 2019

Challenges and recommendations to improve the installability and archival stability of omics computational tools

Serghei Mangul, Thiago S. Mosqueiro, Richard J. Abdill…·Ran Blekhman

The paper assesses the installability and archival stability of computational biology tools, finding many are inaccessible or hard to install, and recommends policy changes to improve these aspects.

90 citationstop 1%

statistical modelbenchmark study

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MicrobiologybioRxivPreprintNov 29, 2018

PUMA: A tool for processing 16S rRNA taxonomy data for analysis and visualization

Keith Mitchell, Christopher Dao, Amanda Freise…·Jordan Moberg Parker

PUMA streamlines 16S rRNA taxonomic data analysis by unifying multiple platforms and tools for efficient and reproducible microbiome research.

DOI 10.1101/482380

metagenomicsexperimental assay

𝕏 PostBluesky