Author

Lina Kim

ETH ZurichORCID 0000-0002-2852-2869Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:metagenomics· 2 Approach:benchmark study· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:software / tool· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Nicholas A. BokulichiD· 2 shared Anja AdamoviD· 1 shared Anton LavrinienkoiD· 1 shared Lena FlörliD· 1 shared Michał ZiemskiiD· 1 shared Sven Stoltenberg· 1 shared Zuzana SebechlebskáiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 12 mutual co-author links

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2 shared papersMicrobiology

Nicholas A. BokulichORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Tier-based standards for FAIR sequence data and metadata sharing in microbiome research

Lina Kim, Anton Lavrinienko, Zuzana Sebechlebská, Sven Stoltenberg, Nicholas A. Bokulich

This paper proposes tiered badges and an evaluation tool to assess data sharing compliance in microbiome research and finds that nearly half of publications fail to meet minimum sequence data availability standards.

Nucleic Acids Research · Jul 28, 2025Peer-reviewedMicrobiology

Reproducible acquisition, management, and meta-analysis of nucleotide sequence (meta)data using q2-fondue

Michał Ziemski, Anja Adamov, Lina Kim, Lena Flörl, Nicholas A. Bokulich

This paper introduces q2-fondue, a software plugin for reproducibly acquiring, managing, and analyzing nucleotide sequence data from public repositories.

Bioinformatics · Sep 19, 2022Peer-reviewedBioinformatics