Author

Andaç Demir

Novartis (Switzerland)ORCID 0000-0002-2869-3879Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:drug response / drug discovery· 1 Assay:imaging· 1

Frequent Co-Authors

Bülent KızıltaniD· 2 shared Barış CoşkunuzeriD· 1 shared Elie MassaadiD· 1 shared Ignacio Segovia-DomíngueziD· 1 shared Yulia R. GeliD· 1 shared Yuzhou CheniD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

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2 shared papersBioinformatics

Bülent KızıltanORCID

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2 papers

Recent·Most cited

Topology-Aware Focal Loss for 3D Image Segmentation

Andaç Demir, Elie Massaad, Bülent Kızıltan

This paper introduces a topology-aware focal loss to improve 3D image segmentation by addressing topological errors through a Wasserstein distance-based constraint.

bioRxiv · Apr 21, 2023 · PreprintBioinformatics

ToDD: Topological Compound Fingerprinting in Computer-Aided Drug Discovery

Andaç Demir, Barış Coşkunuzer, Ignacio Segovia-Domínguez, Yuzhou Chen, Yulia R. Gel, Bülent Kızıltan

The paper introduces a topological fingerprinting method for drug discovery that outperforms existing approaches on benchmark datasets.

bioRxiv · Nov 8, 2022 · PreprintMolecular Biology