Author

Vaishali Bhardwaj

Mayo ClinicORCID 0000-0002-2880-0187Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:CITE-seq· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Li LiuiD· 2 shared Rekha MudappathiiD· 2 shared

Activity by Year

2025-2025 · peak 2/yr

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2 top collaborators · 1 mutual co-author link

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2 shared papersBioinformatics

Li LiuORCID

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2 papers

Recent·Most cited

Discovering Condition-specific Cell Populations via Integrative Clustering of Single-cell Data

Rekha Mudappathi, Vaishali Bhardwaj, Li Liu

INCLOSE identifies condition-specific cell populations by integrating single-cell omics data and metadata, revealing immune suppression in acute myeloid leukemia.

bioRxiv · Oct 3, 2025 · PreprintBioinformatics

Single-cell Analysis of Intracellular Transport and Expression of Cell Surface Proteins

Rekha Mudappathi, Vaishali Bhardwaj, Li Liu

This study introduces MPET, a computational framework to analyze how intracellular transport affects surface protein expression using CITE-seq data from COVID-19 patients.

bioRxiv · Jun 9, 2025 · PreprintBioinformatics